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Volume 30, Number 6—June 2024
Dispatch

Molecular Identification of Fonsecaea monophora, Novel Agent of Fungal Brain Abscess

Author affiliation: All India Institute of Medical Sciences, New Delhi, India

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Abstract

A 3-year-old patient in India experiencing headaches and seizures was diagnosed with a fungal infection, initially misidentified as Cladophialophora bantiana. Follow-up sequencing identified the isolate to be Fonsecaea monophora fungus. This case demonstrates the use of molecular methods for the correct identification of F. monophora, an agent of fungal brain abscess.

A 3-year-old boy was admitted to the All India Institute of Medical Sciences, New Delhi, India, with headache for 3 weeks and 2 episodes of seizures. He had no history of fever, vomiting, or altered senses; no history suggestive of tuberculosis; and no predisposing conditions. Fundoscopic examination revealed bilateral papilledema. Magnetic resonance imaging of the brain showed multiple contrast enhancing lesions. Contrast enhanced computed tomography of chest and abdomen revealed well-defined nodules in the right lung and both lobes of the liver. Cerebrospinal fluid examination showed a glucose level of 51 mg/dL (reference range 40–70 mg/dL), protein level of 82 mg/dL (reference range 12–60 mg/dL), and leukocyte count of 45 cells/mm3 (reference range 0–20 cells/mm3) with 22% neutrophils. We found persistent eosinophilia (up to 31%) on sequential blood counts.

We conducted a potassium hydroxide-calcofluor white examination of the ultrasound-guided liver biopsy sample, which showed dematiaceous septate hyphae 3–6 μm in diameter. The hyphae showed bulbous dilatations at irregular intervals. Light microscopic examination also showed dematiaceous septate hyphae. A brain biopsy taken from the right parietal lesion showed similar dematiaceous septate hyphae on potassium hydroxide-calcofluor white examination. Histologic examination of both samples showed granulomatous inflammation with hyphae of dematiaceous fungi. We administered intravenous liposomal amphotericin B and voriconazole and continued treatment for 9 weeks.

Figure 1

Lactophenol cotton blue mount of a culture from a brain biopsy sample from a 3-year-old patient in India with Fonsecaea monophora infection, showing dematiaceous septate hyphae with different types of conidiation (arrowheads). A) Multicelled sessile conidial chains resembling genus Cladophialophora, leading to the initial misidentification. B) Fonsecaea-type conidiation. C) Rhinocladiella-type conidiation. D) Asterisks of Fonsecaea-type conidiation.

Figure 1. Lactophenol cotton blue mount of a culture from a brain biopsy sample from a 3-year-old patient in India with Fonsecaea monophorainfection, showing dematiaceous septate hyphae with different types...

We performed a fungal culture of the liver biopsy, but no growth was detected. The brain biopsy sample grew dark brown-black velvety colonies on sabouraud dextrose agar at both 25° and 37°C after 9 days of incubation. Lactophenol cotton blue mount showed septate brown hyphae with moderately long sparsely branched chains of smooth oval brown conidia (Figure 1). The organism was initially misidentified as Cladophialophora bantiana because of its known preponderance in cases of invasive fungal disease of the central nervous system (CNS).

We repeated brain imaging after the intravenous treatment course. Imaging showed the lesions had greatly reduced in size and number. We started the patient on an oral combination of flucytosine and voriconazole. After 8 weeks on the oral regimen, the patient’s symptoms resolved, and imaging showed near-complete radiologic resolution of the lesions. We stopped antifungal treatment. We followed up with the patient after a year, and there was no recurrence.

We retrospectively performed molecular identification of the culture isolate from the brain biopsy sample. We ran conventional PCR on the extracted DNA targeting the internal transcribed spacer (ITS) region of the 18s rDNA. We conducted sequencing by using an ABI 3730XL automated sequencer (ThermoFisher Scientific, https://www.thermofisher.com).

We edited sequences by using Geneious Prime 2023.2.1 (Geneious, https://www.geneious.com). We conducted a basic local alignment search tool inquiry of the sequenced region in GenBank, resulting in 98.95% identity with F. monophora fungal strain CBS 269.37. We analyzed phylogenetically informative polymorphic sites in the ITS region of Fonsecaea spp. according to de Hoog et al. (1) and found 12 of 13 bases were identical with F. monophora, confirming the identification (GenBank accession no. OR773059) (Table).

Figure 2

Phylogenetic relatedness of the isolate cultured from the brain biopsy sample from a 3-year-old patient in India with Fonsecaea monophora fungus infection (bold) compared with selected global isolates of Fonsecaea spp. Tree was derived by using the maximum-likelihood method with Kimura 2 parameter model and 1,000 bootstrap replicates implemented in MEGA 11.0.13 (MEGA, https://www.megasoftware.net).

Figure 2. Phylogenetic relatedness of the isolate cultured from the brain biopsy sample from a 3-year-old patient in India with Fonsecaea monophora fungus infection (bold) compared with selected global isolates of ...

We derived the phylogenetic relatedness of our isolate with selected global isolates of Fonsecaea spp. fungus by using MEGA version 11.0.13 software (MEGA, https://www.megasoftware.net). We aligned the sequences by using multiple sequence comparison by log-expectation algorithm, followed by phylogenetic model determination. We implemented the maximum-likelihood method with the Kimura 2 parameter model with 1,000 bootstrap replicates (Figure 2).

F. monophora was first described as a separate fungal species by de Hoog et al. (1) in 2004. The next year, Surash et al. (2) published a case report of F. monophora CNS invasion. They also reported 2 previous cases of F. monophora CNS invasion identified retrospectively with sequencing (3,4). Since then, 8 other case reports of F. monophora CNS invasion have been published (512) (Appendix Table). Many cases of brain abscesses caused by F. pedrosoi fungus have been described in literature. Although most of them were reported before F. monophora was established as a species in 2004, some have been described more recently. Of note, none of the cases in the literature have had identifications confirmed by molecular methods. Both F. monophora and F. pedrosoi are causative agents of human chromoblastomycosis. Although F. pedrosoi is usually associated with chromoblastomycosis, F. monophora is considered a more general opportunist. F. monophora is also more neurotropic (1). Because F. monophora cannot be reliably differentiated from F. pedrosoi on the basis of phenotypic methods, some cases attributed to F. pedrosoi may have been caused by F. monophora. Molecular methods are essential for definitive identification. A review of brain abscess cases caused by F. pedrosoi was provided by Madhugiri et al. (13).

We have reviewed only cases in which CNS involvement was seen with F. monophora. In the cases we reviewed, F. monophora was limited to the CNS, except for 1 case where there was also involvement of the left foot (5). Headache was the most common symptom experienced and was accompanied by focal neurologic deficits and symptoms of increased intracranial pressure in some cases. Patient symptoms usually occurred for weeks before care was sought. Three cases were associated with multiple lesions in the CNS discovered by radiologic examination (2,4,5). In all the cases, final identification was confirmed by sequencing the ITS region from 18s rDNA extracted from culture growth.

Antifungal-susceptibility testing was done in 7 cases. Most results showed low MICs for the commonly used antifungals. Three of them reported MICs of >2 μg/mL for amphotericin B (8,9,11). Two reports described higher MICs for flucytosine (9,10). Those MICs are like results obtained previously from 25 clinical isolates of F. monophora (14). In a separate study on 10 clinical isolates of F. monophora, terbinafine and voriconazole were the drugs with the best in vitro activity, showing MICs <0.25 mg/L, whereas fluconazole, flucytosine, amphotericin B, caspofungin, and micafungin showed high MICs (15). Because voriconazole can penetrate the CNS well, it can be considered the drug of choice for CNS infections; amphotericin B monotherapy should be avoided. Terbinafine may also be considered in combination with voriconazole.

Six of the 11 patients we describe died. In 3 patients the immediate cause of death was not directly related to the fungal infection (4,10,12). Of the other 3 patients, surgical excision was not done in 2 (3,9). Of the 5 patients who survived, all were treated with surgical excision and various combinations of antifungals (2,57,11). All the patients improved greatly within weeks to months, and no recurrence of infection was reported after stopping antifungals. A combined approach with early surgical intervention and combination antifungals greatly improves outcome. Of note, serum (1,3)-β-D-glucan levels were elevated in 2 cases and decreased gradually with successful therapy (6,11). Thus (1,3)-β-D-glucan can be potentially used as a biomarker for follow-up.

Conclusions

This case and review emphasizes the importance of molecular methods for the definitive identification of F. monophora, a cause of fungal brain abscess that is increasingly being reported. All the published cases to date have used sequencing for final identification. Targeting the ITS region of 18s rDNA, the universal fungal barcode, is usually sufficient, and no additional foci need to be sequenced. Although the implication of F. monophora identification for patient management is not clear, patient management may be changed in the future once more data are available.

Dr. Gourav is a senior resident in the Department of Microbiology, All India Institute of Medical Sciences, Ansari Nagar, New Delhi, with a research interest in clinical mycology.

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References

  1. De Hoog  GS, Attili-Angelis  D, Vicente  VA, Van Den Ende  AH, Queiroz-Telles  F. Molecular ecology and pathogenic potential of Fonsecaea species. Med Mycol. 2004;42:40516. DOIPubMedGoogle Scholar
  2. Surash  S, Tyagi  A, De Hoog  GS, Zeng  JS, Barton  RC, Hobson  RP. Cerebral phaeohyphomycosis caused by Fonsecaea monophora. Med Mycol. 2005;43:46572. DOIPubMedGoogle Scholar
  3. Lucasse  C, Chardome  J, Magis  P. Cerebral mycosis from Cladosporium trichoides in a native of the Belgian Congo [in French]. Ann Soc Belg Med Trop (1920). 1954;34:475–8.
  4. Nóbrega  JP, Rosemberg  S, Adami  AM, Heins-Vaccari  EM, Lacaz  CS, de Brito  T. Fonsecaea pedrosoi cerebral phaeohyphomycosis (“chromoblastomycosis”): first human culture-proven case reported in Brazil. Rev Inst Med Trop São Paulo. 2003;45:21720. DOIPubMedGoogle Scholar
  5. Takei  H, Goodman  JC, Powell  SZ. Cerebral phaeohyphomycosis caused by ladophialophora bantiana and Fonsecaea monophora: report of three cases. Clin Neuropathol. 2007;26:217. DOIPubMedGoogle Scholar
  6. Koo  S, Klompas  M, Marty  FM. Fonsecaea monophora cerebral phaeohyphomycosis: case report of successful surgical excision and voriconazole treatment and review. Med Mycol. 2010;48:76974. DOIPubMedGoogle Scholar
  7. Doymaz  MZ, Seyithanoglu  MF, Hakyemez  İ, Gultepe  BS, Cevik  S, Aslan  T. A case of cerebral phaeohyphomycosis caused by Fonsecaea monophora, a neurotropic dematiaceous fungus, and a review of the literature. Mycoses. 2015;58:18792. DOIPubMedGoogle Scholar
  8. Bagla  P, Loeffelholz  M, Blanton  LS. Cerebral phaeohyphomycosis by Fonsecaea monophora: Report in a patient with AIDS and a ring enhancing lesion. Med Mycol Case Rep. 2016;12:47. DOIPubMedGoogle Scholar
  9. Varghese  P, Jalal  MJA, Ahmad  S, Khan  Z, Johny  M, Mahadevan  P, et al. Cerebral phaeohyphomycosis caused by Fonsecaea monophora: first report from India. Int J Surg Med. 2016;2:449. DOIGoogle Scholar
  10. Stokes  W, Fuller  J, Meier-Stephenson  V, Remington  L, Meatherall  BL. Case report of cerebral phaeohyphomycosis caused by Fonsecaea monophora. Off J Assoc Med Microbiol Infect Dis Canada. 2017;2:86–92.
  11. Dobias  R, Filip  M, Vragova  K, Dolinska  D, Zavodna  P, Dujka  A, et al. Successful surgical excision of cerebral abscess caused by Fonsecaea monophora in an immunocompetent patient and review of literature. Folia Microbiol (Praha). 2019;64:3838. DOIPubMedGoogle Scholar
  12. Helbig  S, Thuermer  A, Dengl  M, Krukowski  P, de With  K. Cerebral abscess by Fonsecaea monophora—the first case reported in Germany. Open Forum Infect Dis. 2018;5:ofy129.
  13. Madhugiri  VS, Singh  R, Vyavahare  M, Vijayahari  R, Sasidharan  GM, Kuma  VR, et al. Opportunistic Fonsecaea pedrosoi brain abscess in a patient with non-cirrhotic portal fibrosis-induced hypersplenism—a novel association. Br J Neurosurg. 2013;27:6903. DOIPubMedGoogle Scholar
  14. Najafzadeh  MJ, Badali  H, Illnait-Zaragozi  MT, De Hoog  GS, Meis  JF. In vitro activities of eight antifungal drugs against 55 clinical isolates of Fonsecaea spp. Antimicrob Agents Chemother. 2010;54:16368. DOIPubMedGoogle Scholar
  15. Coelho  RA, Brito-Santos  F, Figueiredo-Carvalho  MHG, Silva  JVDS, Gutierrez-Galhardo  MC, do Valle  ACF, et al. Molecular identification and antifungal susceptibility profiles of clinical strains of Fonsecaea spp. isolated from patients with chromoblastomycosis in Rio de Janeiro, Brazil. PLoS Negl Trop Dis. 2018;12:e0006675. DOIPubMedGoogle Scholar

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Cite This Article

DOI: 10.3201/eid3006.240077

Original Publication Date: May 15, 2024

Table of Contents – Volume 30, Number 6—June 2024

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Immaculata Xess, Department of Microbiology, All India Institute of Medical Sciences, Ansari Nagar, New Delhi 110029, India

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Page created: April 24, 2024
Page updated: May 22, 2024
Page reviewed: May 22, 2024
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